BLASTN 2.2.3 [May-13-2002]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= BA0AB013H01SP1|AL426595
(840 letters)
Database: Klactis 3X assemblage 11/02
1807 sequences; 10,358,551 total letters
Searching....done
Score E
Sequences producing significant alignments: (bits) Value
3x_Contig609 1656 0.0
>3x_Contig609
Length = 1941
Score = 1656 bits (835), Expect = 0.0
Identities = 838/840 (99%)
Strand = Plus / Minus
Query: 1 gccagaattttggttttcaactacttttgatgtccgaaaccbggggaggggggggacaga 60
||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||
Sbjct: 1685 gccagaattttggttttcaactacttttgatgtccgaaaccgggggaggggggggacaga 1626
Query: 61 agagatggacgaaatctattttatccacgtgacatagatcacgtggatngtttattttcc 120
|||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||
Sbjct: 1625 agagatggacgaaatctattttatccacgtgacatagatcacgtggatagtttattttcc 1566
Query: 121 gggtaataaatacagcaggtctctaagcacggcaatggaaaaaaaaagcctattacgatt 180
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1565 gggtaataaatacagcaggtctctaagcacggcaatggaaaaaaaaagcctattacgatt 1506
Query: 181 tgtaccggtagcgggccggtagggaaactcgtctttctgttactttcctttttcctgccc 240
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1505 tgtaccggtagcgggccggtagggaaactcgtctttctgttactttcctttttcctgccc 1446
Query: 241 accacctcatcgtatccctctatagaaaggcagaagggaagggaaagaaaagcctcagta 300
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1445 accacctcatcgtatccctctatagaaaggcagaagggaagggaaagaaaagcctcagta 1386
Query: 301 caggagccctgaacagaaatcctgaacagggctcctgtccagggcagagcacaccattag 360
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1385 caggagccctgaacagaaatcctgaacagggctcctgtccagggcagagcacaccattag 1326
Query: 361 cactggcttggtggaaccagaatttccgtacgccttgccttgcgaagggcttcaagacag 420
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1325 cactggcttggtggaaccagaatttccgtacgccttgccttgcgaagggcttcaagacag 1266
Query: 421 gctgttagtggttttcaatgccggatttgatctctgatccagctagtcagctaactctta 480
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1265 gctgttagtggttttcaatgccggatttgatctctgatccagctagtcagctaactctta 1206
Query: 481 cttccatagatctaagtgatccctacagattactcatacctgatgagatgtgatgcgctc 540
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1205 cttccatagatctaagtgatccctacagattactcatacctgatgagatgtgatgcgctc 1146
Query: 541 atgtggataggccttgtgtacggaaaaaaaaaaaaattcctcttcgtctttgcagagatg 600
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1145 atgtggataggccttgtgtacggaaaaaaaaaaaaattcctcttcgtctttgcagagatg 1086
Query: 601 actctaagtaaaaatgataaaggtgaaatttttcactttttcatggacgaatttcaccat 660
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1085 actctaagtaaaaatgataaaggtgaaatttttcactttttcatggacgaatttcaccat 1026
Query: 661 atatttaaggaaaaagaacttcgccgtatatataaagcgacgaataattttttcgattcc 720
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1025 atatttaaggaaaaagaacttcgccgtatatataaagcgacgaataattttttcgattcc 966
Query: 721 attcttctgtcttggccttacaccctcttgattccttttgtgtttagtattgtttgtgga 780
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 965 attcttctgtcttggccttacaccctcttgattccttttgtgtttagtattgtttgtgga 906
Query: 781 agttttagttggatctttctctgagctcattaaagatagattaataacctactacctacc 840
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 905 agttttagttggatctttctctgagctcattaaagatagattaataacctactacctacc 846
Database: Klactis 3X assemblage 11/02
Posted date: Nov 27, 2002 12:23 PM
Number of letters in database: 10,358,551
Number of sequences in database: 1807
Lambda K H
1.38 0.711 1.31
Gapped
Lambda K H
1.38 0.711 1.31
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 5, Extension: 2
Number of Hits to DB: 13,770
Number of Sequences: 1807
Number of extensions: 13770
Number of successful extensions: 188
Number of sequences better than 1.0e-20: 1
length of query: 840
length of database: 10,358,551
effective HSP length: 16
effective length of query: 824
effective length of database: 10,329,639
effective search space: 8511622536
effective search space used: 8511622536
T: 0
A: 40
X1: 6 (11.9 bits)
X2: 15 (29.8 bits)
S1: 12 (24.3 bits)
S2: 50 (99.7 bits)